Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch.

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Title

Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch.

Content partner

The University of Auckland Library

Collection

ResearchSpace@Auckland

Description

Late in 2020, two genetically-distinct clusters of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) with mutations of biological concern were reported, one in the United Kingdom and one in South Africa. Using a combination of data from routine surveillance, genomic sequencing and international travel we track the international dispersal of lineages B.1.1.7 and B.1.351 (variant 501Y-V2). We account for potential biases in genomic surveillance efforts by including passenger volumes ...

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Format

Research paper

Research format

Journal article

Date created

2021-01

Creator

O'Toole, Áine / Hill, Verity / Pybus, Oliver G / Watts, Alexander / Bogoch, Issac I / Khan, Kamran / Messina, Jane P / COVID-19 Genomics UK (COG-UK) consortium / Network for Genomic Surveillance in South Africa (NGS-SA) / Brazil-UK CADDE Genomic Network / Tegally, Houriiyah / Lessells, Richard R / Giandhari, Jennifer / Pillay, Sureshnee / Tumedi, Kefentse Arnold / Nyepetsi, Gape / Kebabonye, Malebogo / Matsheka, Maitshwarelo / Mine, Madisa / Tokajian, Sima / Hassan, Hamad / Salloum, Tamara / Merhi, Georgi / Koweyes, Jad / Geoghegan, Jemma L / de Ligt, Joep / Ren, Xiaoyun / Storey, Matthew / Freed, Nikki E / Pattabiraman, Chitra / Prasad, Pramada / Desai, Anita S / Vasanthapuram, Ravi / Schulz, Thomas F / Steinbrück, Lars / Stadler, Tanja / Swiss Viollier Sequencing Consortium / Parisi, Antonio / Bianco, Angelica / García de Viedma, Darío / Buenestado-Serrano, Sergio / Borges, Vítor / Isidro, Joana / Duarte, Sílvia / Gomes, João Paulo / Zuckerman, Neta S / Mandelboim, Michal / Mor, Orna / Seemann, Torsten / Arnott, Alicia / Draper, Jenny / Gall, Mailie / Rawlinson, William / Deveson, Ira / Schlebusch, Sanmarié / McMahon, Jamie / Leong, Lex / Lim, Chuan Kok / Chironna, Maria / Loconsole, Daniela / Bal, Antonin / Josset, Laurence / Holmes, Edward / St George, Kirsten / Lasek-Nesselquist, Erica / Sikkema, Reina S / Oude Munnink, Bas / Koopmans, Marion / Brytting, Mia / Sudha Rani, V / Pavani, S / Smura, Teemu / Heim, Albert / Kurkela, Satu / Umair, Massab / Salman, Muhammad / Bartolini, Barbara / Rueca, Martina / Drosten, Christian / Wolff, Thorsten / Silander, Olin / Eggink, Dirk / Reusken, Chantal / Vennema, Harry / Park, Aekyung / Carrington, Christine / Sahadeo, Nikita / Carr, Michael / Gonzalez, Gabo / SEARCH Alliance San Diego / National Virus Reference Laboratory / SeqCOVID-Spain / Danish Covid-19 Genome Consortium (DCGC) / Communicable Diseases Genomic Network (CDGN) / Dutch National SARS-CoV-2 surveillance program / Division of Emerging Infectious Diseases (KDCA) / de Oliveira, Tulio / Faria, Nuno / Rambaut, Andrew / Kraemer, Moritz UG

URL

https://hdl.handle.net/2292/66420

Related subjects

COVID-19 Genomics UK (COG-UK) consortium / Network for Genomic Surveillance in South Africa (NGS-SA) / Brazil-UK CADDE Genomic Network / Swiss Viollier Sequencing Consortium / SEARCH Alliance San Diego / National Virus Reference Laboratory / SeqCOVID-Spain / Danish Covid-19 Genome Consortium (DCGC) / Communicable Diseases Genomic Network (CDGN) / Dutch National SARS-CoV-2 surveillance program / Division of Emerging Infectious Diseases (KDCA) / B.1.1.7 / B.1.351 / N501Y / SARS-CoV-2 / air travel / coronavirus / genome sequencing / genomic epidemiology / genomic surveillance / genomics / pandemic / sequencing / surveillance / virus / 32 Biomedical and Clinical Sciences / 42 Health Sciences / Vaccine Related / Infectious Diseases / Genetics / Biodefense / Emerging Infectious Diseases / Pneumonia / Lung / Pneumonia & Influenza / Prevention / 3 Good Health and Well Being

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